fd-optnode01_cb

2 x AMD Opteron 6274 testing with a HP ProLiant DL165 G7 and Matrox s MGA G200e [Pilot] (SEP1) on RedHatEnterpriseServer 6.3 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1302180-SU-FDOPTNODE69
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fd-optnode01 cb test
February 18 2013
 
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fd-optnode01_cbOpenBenchmarking.orgPhoronix Test Suite2 x AMD Opteron 6274 @ 2.20GHz (32 Cores)HP ProLiant DL165 G7AMD ATI RD890 + SB7x0/SB8x0/SB9x08 x 16384 MB DDR3-1067MHz100GB LOGICAL VOLUMEMatrox s MGA G200e [Pilot] (SEP1)Intel 82576 Gigabit ConnectionRedHatEnterpriseServer 6.32.6.32-279.el6.x86_64 (x86_64)GCC 4.4.6 20120305ext4ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemFd-optnode01_cb BenchmarksSystem Logs- --build=x86_64-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --with-ppl --with-tune=generic - Scaling Governor: ondemand

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchfd-optnode01 cb test48121620SE +/- 0.09, N = 315.321. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentfd-optnode01 cb test246810SE +/- 0.10, N = 67.711. (CC) gcc options: -O3 -lm -lpthread