ubuntu-1204-32-ni-s7-comp_bio-G-G

AMD Athlon 64 X2 4600+ testing with a MSI MS-7309 v1.0 and ATI Radeon HD 4600 512MB on Ubuntu 12.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1212023-SU-UBUNTU12051
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Result
Identifier
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Performance Per
Dollar
Date
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  Test
  Duration
AMD Athlon 64 X2 4600
December 02 2012
 
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ubuntu-1204-32-ni-s7-comp_bio-G-GOpenBenchmarking.orgPhoronix Test SuiteAMD Athlon 64 X2 4600+ @ 2.41GHz (2 Cores)MSI MS-7309 v1.0NVIDIA MCP612048MB1000GB Hitachi HDT72101 + 160GB 1600BMV ExternalATI Radeon HD 4600 512MBRealtek ALC888VA2248Ubuntu 12.043.2.0-34-generic-pae (i686)GNOME 3.2.1X Server 1.11.3fglrx 8.96.43.3.11627GCC 4.6ext31280x720ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionUbuntu-1204-32-ni-s7-comp_bio-G-G BenchmarksSystem Logs- --build=i686-linux-gnu --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-targets=all --enable-threads=posix --host=i686-linux-gnu --target=i686-linux-gnu --with-arch-32=i686 --with-tune=generic -v

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchAMD Athlon 64 X2 46001530456075SE +/- 1.17, N = 368.341. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentAMD Athlon 64 X2 4600816243240SE +/- 0.04, N = 332.751. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisAMD Athlon 64 X2 46001632486480SE +/- 0.08, N = 371.07