fd-confb-ws.computational-biology

Intel Xeon E5620 testing on RedHatEnterpriseClient 5.3 via the Phoronix Test Suite.

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fd-confb-ws_cb
November 06 2012
 
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fd-confb-ws_cb

Processor: Intel Xeon E5620 @ 2.40GHz (4 Cores), Chipset: Intel X58 I/O + ICH10, Memory: 6 x 2048 MB 1066MHz, Disk: 500GB Seagate ST3500418AS, Graphics: NVIDIA 05ff, Audio: Intel 82801JI, Network: Broadcom NetXtreme BCM5755 Gigabit PCI

OS: RedHatEnterpriseClient 5.3, Kernel: 2.6.18-128.el5 (x86_64), Display Driver: NVIDIA 1.0.0, Compiler: GCC 4.1.2 20080704, File-System: ext3

Compiler Notes: --disable-dssi --disable-libunwind-exceptions --disable-plugin --enable-__cxa_atexit --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --host=x86_64-redhat-linux --mandir=/usr/share/man --with-cpu=generic --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre
Processor Notes: Scaling Governor: ondemand

fd-confb-ws.computational-biologyOpenBenchmarking.orgPhoronix Test SuiteIntel Xeon E5620 @ 2.40GHz (4 Cores)Intel X58 I/O + ICH106 x 2048 MB 1066MHz500GB Seagate ST3500418ASNVIDIA 05ffIntel 82801JIBroadcom NetXtreme BCM5755 Gigabit PCIRedHatEnterpriseClient 5.32.6.18-128.el5 (x86_64)NVIDIA 1.0.0GCC 4.1.2 20080704ext3ProcessorChipsetMemoryDiskGraphicsAudioNetworkOSKernelDisplay DriverCompilerFile-SystemFd-confb-ws.computational-biology BenchmarksSystem Logs- --disable-dssi --disable-libunwind-exceptions --disable-plugin --enable-__cxa_atexit --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --host=x86_64-redhat-linux --mandir=/usr/share/man --with-cpu=generic --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre - Scaling Governor: ondemand

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchfd-confb-ws_cb714212835SE +/- 0.03, N = 332.091. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentfd-confb-ws_cb3691215SE +/- 0.03, N = 311.521. (CC) gcc options: -O3 -lm -lpthread

fd-confb-ws_cb

Processor: Intel Xeon E5620 @ 2.40GHz (4 Cores), Chipset: Intel X58 I/O + ICH10, Memory: 6 x 2048 MB 1066MHz, Disk: 500GB Seagate ST3500418AS, Graphics: NVIDIA 05ff, Audio: Intel 82801JI, Network: Broadcom NetXtreme BCM5755 Gigabit PCI

OS: RedHatEnterpriseClient 5.3, Kernel: 2.6.18-128.el5 (x86_64), Display Driver: NVIDIA 1.0.0, Compiler: GCC 4.1.2 20080704, File-System: ext3

Compiler Notes: --disable-dssi --disable-libunwind-exceptions --disable-plugin --enable-__cxa_atexit --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --host=x86_64-redhat-linux --mandir=/usr/share/man --with-cpu=generic --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre
Processor Notes: Scaling Governor: ondemand

Testing initiated at 6 November 2012 15:31 by user root.