compbiol

Intel Core i7 740Q testing with a Dell 0874P6 and ATI Mobility Radeon HD 5000 1024MB on Ubuntu 12.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1207129-AR-COMPBIOL091
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compbiol1
July 12 2012
 
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compbiolOpenBenchmarking.orgPhoronix Test SuiteIntel Core i7 740Q @ 1.73GHz (8 Cores)Dell 0874P6Intel Core DMI4096MB320GB Seagate ST9320423ASATI Mobility Radeon HD 5000 1024MB (750/800MHz)IDT 92HD73C1X5Realtek RTL8111/8168B + Broadcom BCM4312 802.11b/gUbuntu 12.043.2.0-26-generic (x86_64)Unity 5.12.0X Server 1.11.3fglrx 8.96.44.2.11627GCC 4.6ext2/ext31366x768ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionCompbiol BenchmarksSystem Logs- Compiz was running on this system.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchcompbiol1612182430SE +/- 0.43, N = 325.83

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentcompbiol148121620SE +/- 0.32, N = 614.66

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysiscompbiol1918273645SE +/- 0.10, N = 338.20