pts/computational-biology

2 x AMD Opteron 4274 HE testing with a MSI MS-91F7 and ASPEED ASPEED Family on Ubuntu 10.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1202097-AR-PTSCOMPUT31
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16
February 09 2012
 
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16

Processor: 2 x AMD Opteron 4274 HE @ 2.50GHz (16 Cores), Motherboard: MSI MS-91F7, Chipset: ATI RD890 + SB700/SB800, Memory: 4 x 8192 MB 1333MHz, Disk: 64GB 9750-4i DISK + 2936GB 9750-4i DISK, Graphics: ASPEED ASPEED Family, Network: Intel 82574L Gigabit Connection

OS: Ubuntu 10.04, Kernel: 3.0.0-14-server (x86_64), Display Driver: aspeed, Compiler: GCC 4.4.3, File-System: ext3

pts/computational-biologyOpenBenchmarking.orgPhoronix Test Suite2 x AMD Opteron 4274 HE @ 2.50GHz (16 Cores)MSI MS-91F7ATI RD890 + SB700/SB8004 x 8192 MB 1333MHz64GB 9750-4i DISK + 2936GB 9750-4i DISKASPEED ASPEED FamilyIntel 82574L Gigabit ConnectionUbuntu 10.043.0.0-14-server (x86_64)aspeedGCC 4.4.3ext3ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelDisplay DriverCompilerFile-SystemPts/computational-biology BenchmarksSystem Logs

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search1648121620SE +/- 0.06, N = 316.39

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignment16816243240SE +/- 0.07, N = 336.58

16

Processor: 2 x AMD Opteron 4274 HE @ 2.50GHz (16 Cores), Motherboard: MSI MS-91F7, Chipset: ATI RD890 + SB700/SB800, Memory: 4 x 8192 MB 1333MHz, Disk: 64GB 9750-4i DISK + 2936GB 9750-4i DISK, Graphics: ASPEED ASPEED Family, Network: Intel 82574L Gigabit Connection

OS: Ubuntu 10.04, Kernel: 3.0.0-14-server (x86_64), Display Driver: aspeed, Compiler: GCC 4.4.3, File-System: ext3

Testing initiated at 9 February 2012 13:51 by user root.