2011-10-15-0921

Running pts/hmmer-1.1.0, pts/mafft-1.2.0, pts/mrbayes-1.2.0.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1110155-IMAB-201110111
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Result
Identifier
Performance Per
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Date
Run
  Test
  Duration
2011-10-15 09:21
October 15 2011
 
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2011-10-15-0921OpenBenchmarking.orgPhoronix Test SuiteIntel Core i7 930 @ 2.79GHz (8 Cores)Gigabyte X58A-UD5Intel 5520/5500/X58 + ICH10R24064MB500GB Hitachi HDP72505 + 1000GB Hitachi HDS72101 + 164GB Maxtor 6Y160P0 + 500GB FreeAgentDesktopNVIDIA GeForce GTX 260 896MB (576/999MHz)Fedora 152.6.40.6-0.fc15.x86_64 (x86_64)KDE 4.6.5X Server 1.10.4NVIDIA 280.133.3.0 NVIDIA 280.13GCC 4.7.0ext43360x1050ProcessorMotherboardChipsetMemoryDiskGraphicsOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolution2011-10-15-0921 BenchmarksSystem Logs- Intel SpeedStep was enabled.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search2011-10-15 09:2148121620SE +/- 0.11, N = 315.74

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.706Multiple Sequence Alignment2011-10-15 09:21612182430SE +/- 0.04, N = 327.21