results-hmmr-run1

Running pts/hmmer-1.1.0.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1103050-IV-RESULTSHM08
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
results-hmmr-run1
March 05 2011
 


results-hmmr-run1OpenBenchmarking.orgPhoronix Test SuiteAMD Athlon 4850e @ 2.50GHz (2 Cores)ASUS M2A-VMATI RS690 + SB6004 x 1024 MB DDR2-667MHz250GB Western Digital WDC WD2500JB-55R + 160GB Hitachi HDS72161 + 1000GB Hitachi HDT72101NVIDIA GeForce 9500 GTRealtek ALC883SUSE LINUX 11.32.6.34.7-0.7-desktop (x86_64)KDE 4.6.00X Server 1.8.0NVIDIA 260.19.363.3.0 NVIDIA 260.19.36GCC 4.5ext2/ext3ProcessorMotherboardChipsetMemoryDiskGraphicsAudioOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemResults-hmmr-run1 BenchmarksSystem Logs- AMD CnQ was enabled.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchresults-hmmr-run11224364860SE +/- 0.40, N = 353.44