teratec03new-hmmer3

teratec03new-hmmer3

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1802077-TY-TERATEC0318
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teratec03new-hmmer3
February 07 2018
 


teratec03new-hmmer3OpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon E5-2650 0 @ 2.00GHz (32 Cores)Intel S2600GZIntel Xeon E5/Core16 x 4096 MB DDR3-1600MHz Samsung299GB RMS25CB080 + 2396GB RMS25CB080Matrox s MGA G200e [Pilot]Intel I350 Gigabit ConnectionCentOS 6.62.6.32-504.30.3.el6.x86_64 (x86_64)GCC 4.4.7 20120313ext41024x768ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionTeratec03new-hmmer3 BenchmarksSystem Logs- --build=x86_64-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ppl --with-tune=generic - Scaling Governor: acpi-cpufreq ondemand

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchteratec03new-hmmer33691215SE +/- 0.19, N = 611.271. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm