hmmer-1

AMD Ryzen Threadripper 1900X 8-Core testing with a ASRock X399 Taichi and NVIDIA GeForce GTX 1050 Ti 4096MB on Debian 9.3 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1801225-AL-HMMER117523
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
AMD Ryzen Threadripper 1900X 8-Core
January 22 2018
 


hmmer-1OpenBenchmarking.orgPhoronix Test SuiteAMD Ryzen Threadripper 1900X 8-Core @ 3.80GHz (8 Cores / 16 Threads)ASRock X399 TaichiAMD Device 145032768MB512GB SAMSUNG MZVKW512HMJP-00000NVIDIA GeForce GTX 1050 Ti 4096MB (1290/3504MHz)Realtek GenericDELL U2414HIntel I211 Gigabit Connection + Intel Device 24fbDebian 9.34.9.0-5-amd64 (x86_64)NVIDIA 375.824.5.0GCC 6.3.0 20170516btrfs1920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionHmmer-1 BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic -v - Scaling Governor: acpi-cpufreq ondemand

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchAMD Ryzen Threadripper 1900X 8-Core246810SE +/- 0.03, N = 37.581. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm