fangovernortest

Running pts/hmmer-1.1.1, pts/mafft-1.4.0, pts/mrbayes-1.2.0 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1705090-KH-FANGOVERN88
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Bioinformatics 2 Tests
C/C++ Compiler Tests 2 Tests
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full_performance
May 09 2017
 
standard_powersave
May 09 2017
 
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full_performance

Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v
Processor Notes: Scaling Governor: intel_pstate performance

standard_powersave

Processor: 2 x Intel Xeon E5-2683 v4 @ 3.00GHz (64 Cores), Motherboard: Supermicro X10DRFF v1.02, Chipset: Intel Xeon E7 v4/Xeon, Memory: 129024MB, Disk: 44526GB, Graphics: ASPEED ASPEED Family, Network: Intel I210 Gigabit Connection

OS: Ubuntu 16.04, Kernel: 4.4.0-72-generic (x86_64), Compiler: GCC 5.4.0 20160609, File-System: nfs, Screen Resolution: 1024x768

Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v
Processor Notes: Scaling Governor: intel_pstate powersave

fangovernortestOpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon E5-2683 v4 @ 3.00GHz (64 Cores)Supermicro X10DRFF v1.02Intel Xeon E7 v4/Xeon129024MB44526GBASPEED ASPEED FamilyIntel I210 Gigabit ConnectionUbuntu 16.044.4.0-72-generic (x86_64)GCC 5.4.0 20160609nfs1024x768ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionFangovernortest BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v - full_performance: Scaling Governor: intel_pstate performance- standard_powersave: Scaling Governor: intel_pstate powersave

Timed HMMer Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchfull_performancestandard_powersave612182430SE +/- 0.02, N = 3SE +/- 0.00, N = 312.4725.591. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchfull_performancestandard_powersave612182430Min: 12.43 / Avg: 12.47 / Max: 12.5Min: 25.59 / Avg: 25.59 / Max: 25.61. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentfull_performancestandard_powersave1.22852.4573.68554.9146.1425SE +/- 0.07, N = 6SE +/- 0.14, N = 63.945.461. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentfull_performancestandard_powersave246810Min: 3.72 / Avg: 3.94 / Max: 4.16Min: 5.06 / Avg: 5.46 / Max: 5.981. (CC) gcc options: -O3 -lm -lpthread

full_performance

Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v
Processor Notes: Scaling Governor: intel_pstate performance

Testing initiated at 9 May 2017 08:31 by user test.

standard_powersave

Processor: 2 x Intel Xeon E5-2683 v4 @ 3.00GHz (64 Cores), Motherboard: Supermicro X10DRFF v1.02, Chipset: Intel Xeon E7 v4/Xeon, Memory: 129024MB, Disk: 44526GB, Graphics: ASPEED ASPEED Family, Network: Intel I210 Gigabit Connection

OS: Ubuntu 16.04, Kernel: 4.4.0-72-generic (x86_64), Compiler: GCC 5.4.0 20160609, File-System: nfs, Screen Resolution: 1024x768

Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v
Processor Notes: Scaling Governor: intel_pstate powersave

Testing initiated at 9 May 2017 08:35 by user test.