Pairwise Alignment Test Suite (multi-vs-single-core)

Intel Core i7-6700 testing with a Dell 0HD5W2 and Intel Device 1912 on Debian 8.5 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1608244-HA-PAIRWISEA58.

Pairwise Alignment Test Suite (multi-vs-single-core)ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-Systemsingle-coremulti-coreIntel Core i7-6700 @ 3.40GHz (8 Cores)Dell 0HD5W2Intel Device 191f16384MB16251GBIntel Device 1912Intel Device a170DELL U2715HIntel ConnectionDebian 8.53.16.0-4-amd64 (x86_64)GNOME Shell 3.14.4X Server 1.16.4intel 2.21.15GCC 4.9.2 + Clang 3.5.0-10 + LLVM 3.5.0 + ICCnfsOpenBenchmarking.orgCompiler Details- --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i586 --with-arch-directory=amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v Processor Details- Scaling Governor: acpi-cpufreq ondemand

Pairwise Alignment Test Suite (multi-vs-single-core)seqan-test-pairwise-alignment: Local DNA Affine alignmentseqan-test-pairwise-alignment: Local DNA Linear alignmentseqan-test-pairwise-alignment: Global DNA Affine alignmentseqan-test-pairwise-alignment: Global DNA Linear alignmentseqan-test-pairwise-alignment: Local Protein Affine alignmentseqan-test-pairwise-alignment: Local Protein Linear alignmentseqan-test-pairwise-alignment: Global Protein Affine alignmentseqan-test-pairwise-alignment: Global Protein Linear alignmentsingle-coremulti-core277.52233.80237.51172.02274.54224.67250.41182.99276.87233.63237.95172.53272.20224.52250.85185.25OpenBenchmarking.org

SEQAN TEST Counting kmers of variable length

Local DNA Affine alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Local DNA Affine alignmentsingle-coremulti-core60120180240300SE +/- 1.36, N = 3SE +/- 1.59, N = 3277.52276.871. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

SEQAN TEST Counting kmers of variable length

Local DNA Linear alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Local DNA Linear alignmentsingle-coremulti-core50100150200250SE +/- 0.24, N = 3SE +/- 0.05, N = 3233.80233.631. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

SEQAN TEST Counting kmers of variable length

Global DNA Affine alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Global DNA Affine alignmentsingle-coremulti-core50100150200250SE +/- 0.36, N = 3SE +/- 0.49, N = 3237.51237.951. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

SEQAN TEST Counting kmers of variable length

Global DNA Linear alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Global DNA Linear alignmentsingle-coremulti-core4080120160200SE +/- 0.03, N = 3SE +/- 0.47, N = 3172.02172.531. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

SEQAN TEST Counting kmers of variable length

Local Protein Affine alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Local Protein Affine alignmentsingle-coremulti-core60120180240300SE +/- 1.07, N = 3SE +/- 1.36, N = 3274.54272.201. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

SEQAN TEST Counting kmers of variable length

Local Protein Linear alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Local Protein Linear alignmentsingle-coremulti-core50100150200250SE +/- 0.18, N = 3SE +/- 0.22, N = 3224.67224.521. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

SEQAN TEST Counting kmers of variable length

Global Protein Affine alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Global Protein Affine alignmentsingle-coremulti-core50100150200250SE +/- 1.67, N = 3SE +/- 0.33, N = 3250.41250.851. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

SEQAN TEST Counting kmers of variable length

Global Protein Linear alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Global Protein Linear alignmentsingle-coremulti-core4080120160200SE +/- 1.20, N = 3SE +/- 3.10, N = 3182.99185.251. (CXX) clang++ options: -std=c++11 -std=c++14 -O3 -rdynamic -lrt -lpthread

Phoronix Test Suite v10.8.4