Different Compilers for Kmer Counting

Comparison of different compilers

HTML result view exported from: https://openbenchmarking.org/result/1608016-HA-DIFFERENT49.

Different Compilers for Kmer CountingProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionClangGCCIntel Core i7-6700 @ 3.40GHz (8 Cores)Dell 0HD5W2Intel Device 191f16384MB16251GBLLVMpipeIntel Device a170DELL U2715HIntel ConnectionDebian 8.53.16.0-4-amd64 (x86_64)GNOME Shell 3.14.4X Server 1.16.4intel 2.21.153.0 Mesa 10.3.2 Gallium 0.4Clang 3.5.0-10 + GCC 4.9.2 + LLVM 3.5.0nfs2560x1440GCC 4.9.2 + Clang 3.5.0-10 + LLVM 3.5.0OpenBenchmarking.orgCompiler Details- Clang: Optimized build; Built Feb 27 2015 (17:19:01); Default target: x86_64-pc-linux-gnu; Host CPU: x86-64 - GCC: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i586 --with-arch-directory=amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v Processor Details- Scaling Governor: acpi-cpufreq ondemand

Different Compilers for Kmer Countingseqan-test-kmer-counting: Counting 10-mersseqan-test-kmer-counting: Counting 15-mersClangGCC39.82110.5636.24118.80OpenBenchmarking.org

SEQAN TEST Counting kmers of variable length

Counting 10-mers

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Counting 10-mersClangGCC918273645SE +/- 1.65, N = 6SE +/- 0.68, N = 339.8236.24

SEQAN TEST Counting kmers of variable length

Counting 15-mers

OpenBenchmarking.orgSeconds, Fewer Is BetterSEQAN TEST Counting kmers of variable length 2.2.0Counting 15-mersClangGCC306090120150SE +/- 0.78, N = 3SE +/- 0.58, N = 3110.56118.80

Phoronix Test Suite v10.8.4