hmmer-results

Intel Core 2 Duo U7700 testing with a Dell 0F331C and Intel Mobile 945GM/GMS 943/940GML IGP on Gentoo/Linux via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1601246-HA-HMMERRESU24
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Run Management

Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
1
January 24 2016
 


hmmer-resultsOpenBenchmarking.orgPhoronix Test SuiteIntel Core 2 Duo U7700 @ 1.33GHz (2 Cores)Dell 0F331CIntel Mobile 945GM/PM/GMS + ICH7-M2048MB80GB TOSHIBA MK8009GAIntel Mobile 945GM/GMS 943/940GML IGPSigmaTel STAC9200Broadcom NetXtreme BCM5752 Gigabit PCI + Intel PRO/WirelessGentoo/Linux4.4.0-gentoo (x86_64)GCC 4.9.3 + LLVM 3.5.0btrfs1280x800ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelCompilerFile-SystemScreen ResolutionHmmer-results PerformanceSystem Logs- --bindir=/usr/x86_64-pc-linux-gnu/gcc-bin/4.9.3 --build=x86_64-pc-linux-gnu --datadir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.9.3 --disable-altivec --disable-fixed-point --disable-libcilkrts --disable-libgcj --disable-libmudflap --disable-libssp --disable-werror --enable-__cxa_atexit --enable-checking=release --enable-clocale=gnu --enable-languages=c,c++,fortran --enable-libgomp --enable-libsanitizer --enable-libstdcxx-time --enable-lto --enable-multilib --enable-nls --enable-obsolete --enable-secureplt --enable-shared --enable-targets=all --enable-threads=posix --host=x86_64-pc-linux-gnu --includedir=/usr/lib/gcc/x86_64-pc-linux-gnu/4.9.3/include --mandir=/usr/share/gcc-data/x86_64-pc-linux-gnu/4.9.3/man --with-multilib-list=m32,m64 --with-python-dir=/share/gcc-data/x86_64-pc-linux-gnu/4.9.3/python --without-cloog

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search120406080100SE +/- 0.73, N = 3105.211. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm