BIOLOGICO

AMD FX-8350 Eight-Core testing with a ASUS SABERTOOTH 990FX and eVGA NVIDIA GeForce GT 640 2048MB on Ubuntu 14.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1401041-SO-BIOLOGICO19
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Date
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BIOLOGICO-1
January 05 2014
 
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BIOLOGICOOpenBenchmarking.orgPhoronix Test SuiteAMD FX-8350 Eight-Core @ 4.66GHz (8 Cores)ASUS SABERTOOTH 990FXAMD RD890 bridge8192MB60GB Mushkin MKNSSDCLeVGA NVIDIA GeForce GT 640 2048MB (901/667MHz)Realtek ALC892Sony SDM-HS73Realtek RTL8111/8168/8411Ubuntu 14.043.12.0-4-generic (x86_64)Unity 7.1.2X Server 1.14.54.3.0GCC 4.8ext41280x1024ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerOpenGLCompilerFile-SystemScreen ResolutionBIOLOGICO BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchBIOLOGICO-13691215SE +/- 0.04, N = 310.431. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentBIOLOGICO-11.2242.4483.6724.8966.12SE +/- 0.17, N = 65.441. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisBIOLOGICO-13691215SE +/- 0.01, N = 313.58