Bare metal

Intel Xeon E3-1245 v3 testing with a Supermicro X10SL7-F v0123456789 and ASPEED ASPEED Family on CentOS 6.4 via the Phoronix Test Suite.

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Bioinformatics 3 Tests
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Stock CentOS 6.4
July 20 2013
 
Intel Xeon E3-1245 v3
July 20 2013
 
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July 21 2013
 
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Bare metalProcessorMotherboardChipsetMemoryDiskGraphicsNetworkAudioOSKernelCompilerFile-SystemStock CentOS 6.4Intel Xeon E3-1245 v3KVMIntel Xeon E3-1245 v3 @ 3.40GHz (8 Cores)Supermicro X10SL7-F v0123456789Intel Xeon E3-1200 v3 DRAM2 x 8192 MB DDR3-1600MHz2 x 1000GB Seagate ST1000NM0033-9ZMASPEED ASPEED FamilyIntel I210 Gigabit ConnectionCentOS 6.42.6.32-358.14.1.el6.x86_64 (x86_64)GCC 4.4.7 20120313ext4Intel Core @ 3.39GHz (8 Cores)Red Hat KVMRed Hat Virtio1 x 8192 MB RAM2GBCirrus Logic GD 5446Intel 82801FB/FBM/FR/FW/FRWRed Hat Virtio deviceOpenBenchmarking.orgCompiler Details- --build=x86_64-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --with-ppl --with-tune=generic System Details- SELinux: Enabled.Disk Mount Options Details- Stock CentOS 6.4, KVM: barrier=1,data=ordered,relatime,rw,seclabelProcessor Details- Intel Xeon E3-1245 v3: Scaling Governor: acpi- freq ondemand

Bare metalpostmark: Disk Transaction Performancedolfyn: Computational Fluid Dynamicshmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentvpxenc: vpxenchimeno: Poisson Pressure Solverc-ray: Total Timesmallpt: Global Illumination Renderer; 100 Samplesopenssl: RSA 4096-bit Performancecompress-pbzip2: 256MB File Compressionphpbench: PHP Benchmark SuiteStock CentOS 6.4Intel Xeon E3-1245 v3KVM55995.7026.581857.6341.7983144.877.8711573424.0012.53316442.1183143.63115360OpenBenchmarking.org

PostMark

This is a test of NetApp's PostMark benchmark designed to simulate small-file testing similar to the tasks endured by web and mail servers. This test profile will set PostMark to perform 25,000 transactions with 500 files simultaneously with the file sizes ranging between 5 and 512 kilobytes. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction PerformanceStock CentOS 6.4KVM12002400360048006000SE +/- 82.33, N = 3SE +/- 0.00, N = 3559931641. (CC) gcc options: -O3
OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction PerformanceStock CentOS 6.4KVM10002000300040005000Min: 5434 / Avg: 5598.67 / Max: 5681Min: 3164 / Avg: 3164 / Max: 31641. (CC) gcc options: -O3

Dolfyn

Dolfyn is a Computational Fluid Dynamics (CFD) code of modern numerical simulation techniques. The Dolfyn test profile measures the execution time of the bundled computational fluid dynamics demos that are bundled with Dolfyn. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterDolfyn 0.527Computational Fluid DynamicsIntel Xeon E3-1245 v3612182430SE +/- 0.08, N = 324.00

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchIntel Xeon E3-1245 v33691215SE +/- 0.06, N = 312.531. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentStock CentOS 6.41.28252.5653.84755.136.4125SE +/- 0.06, N = 35.701. (CC) gcc options: -O3 -lm -lpthread

VP8 libvpx Encoding

OpenBenchmarking.orgFrames Per Second, More Is BetterVP8 libvpx Encoding 1.1.0vpxencStock CentOS 6.4612182430SE +/- 0.24, N = 326.581. (CC) gcc options: -m64 -lvpx -lm -lpthread -fomit-frame-pointer -O3

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure SolverStock CentOS 6.4400800120016002000SE +/- 5.07, N = 31857.631. (CC) gcc options: -O3

C-Ray

This is a test of C-Ray, a simple raytracer designed to test the floating-point CPU performance. This test is multi-threaded (16 threads per core), will shoot 8 rays per pixel for anti-aliasing, and will generate a 1600 x 1200 image. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total TimeStock CentOS 6.4KVM1020304050SE +/- 0.01, N = 3SE +/- 0.02, N = 341.7942.111. (CC) gcc options: -lm -lpthread -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total TimeStock CentOS 6.4KVM918273645Min: 41.77 / Avg: 41.79 / Max: 41.81Min: 42.09 / Avg: 42.11 / Max: 42.151. (CC) gcc options: -lm -lpthread -O3

Smallpt

Smallpt is a C++ global illumination renderer written in less than 100 lines of code. Global illumination is done via unbiased Monte Carlo path tracing and there is multi-threading support via the OpenMP library. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 SamplesStock CentOS 6.4KVM20406080100SE +/- 0.00, N = 3SE +/- 0.00, N = 383831. (CXX) g++ options: -fopenmp
OpenBenchmarking.orgSeconds, Fewer Is BetterSmallpt 1.0Global Illumination Renderer; 100 SamplesStock CentOS 6.4KVM1632486480Min: 83 / Avg: 83 / Max: 83Min: 83 / Avg: 83 / Max: 831. (CXX) g++ options: -fopenmp

OpenSSL

OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.0.1cRSA 4096-bit PerformanceStock CentOS 6.4KVM306090120150SE +/- 0.18, N = 3SE +/- 0.18, N = 3144.87143.631. (CC) gcc options: -m64 -O3 -lssl -lcrypto -ldl
OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.0.1cRSA 4096-bit PerformanceStock CentOS 6.4KVM306090120150Min: 144.6 / Avg: 144.87 / Max: 145.2Min: 143.3 / Avg: 143.63 / Max: 143.91. (CC) gcc options: -m64 -O3 -lssl -lcrypto -ldl

Parallel BZIP2 Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.1.6256MB File CompressionStock CentOS 6.4246810SE +/- 0.13, N = 37.871. (CXX) g++ options: -O2 -pthread -lbz2 -lpthread

PHPBench

OpenBenchmarking.orgScore, More Is BetterPHPBench 0.8.1PHP Benchmark SuiteStock CentOS 6.4KVM20K40K60K80K100KSE +/- 94.63, N = 3SE +/- 171.38, N = 3115734115360
OpenBenchmarking.orgScore, More Is BetterPHPBench 0.8.1PHP Benchmark SuiteStock CentOS 6.4KVM20K40K60K80K100KMin: 115593 / Avg: 115734.33 / Max: 115914Min: 115017 / Avg: 115359.67 / Max: 115538