vostrohmmer

Intel Core i5-2410M testing with a Dell 0K8WHD and Intel 2nd Generation Core Family IGP on Ubuntu 12.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1307153-UT-VOSTROHMM10
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Result
Identifier
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Performance Per
Dollar
Date
Run
  Test
  Duration
hmmer
July 15 2013
 


vostrohmmerOpenBenchmarking.orgPhoronix Test SuiteIntel Core i5-2410M @ 2.30GHz (4 Cores)Dell 0K8WHDIntel 2nd Generation Core Family DRAM12288MB500GB Seagate ST9500420ASIntel 2nd Generation Core Family IGPRealtek ALC269VBRealtek RTL8111/8168B + Intel Centrino Wireless-N 1030Ubuntu 12.043.2.0-49-generic (x86_64)Unity 2D 5.18.0X Server 1.11.3intel 2.17.0GCC 4.6ext41366x768ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen ResolutionVostrohmmer BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-arch-32=i686 --with-tune=generic -v - Scaling Governor: acpi- freq ondemand

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchhmmer714212835SE +/- 0.14, N = 329.251. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm