bonecrusher-compbio-001

4 x AMD Opteron 6282 SE testing with a Dell 0VKT0M under Ubuntu 11.10 via the Phoronix Test Suite.

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Identifier
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bonecrusher-compbio-001
April 30 2013
 
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bonecrusher-compbio-001

Processor: 4 x AMD Opteron 6282 SE @ 2.60GHz (64 Cores), Motherboard: Dell 0VKT0M, Chipset: ATI RD890 + SB7x0/SB8x0/SB9x0, Memory: 16 x 16384 MB 1600MHz, Disk: 500GB Seagate ST500NM0011 + 2000GB Seagate ST2000NM0011, Graphics: ASPEED ASPEED Family

OS: Ubuntu 11.10, Kernel: 3.0.0-32-server (x86_64), Display Driver: aspeed, Compiler: GCC 4.6.1, File-System: ext4

System Notes: .

bonecrusher-compbio-001OpenBenchmarking.orgPhoronix Test Suite4 x AMD Opteron 6282 SE @ 2.60GHz (64 Cores)Dell 0VKT0MATI RD890 + SB7x0/SB8x0/SB9x016 x 16384 MB 1600MHz500GB Seagate ST500NM0011 + 2000GB Seagate ST2000NM0011ASPEED ASPEED FamilyUbuntu 11.103.0.0-32-server (x86_64)aspeedGCC 4.6.1ext4ProcessorMotherboardChipsetMemoryDiskGraphicsOSKernelDisplay DriverCompilerFile-SystemBonecrusher-compbio-001 BenchmarksSystem Logs- .

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchbonecrusher-compbio-00148121620SE +/- 0.02, N = 314.55

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentbonecrusher-compbio-0013691215SE +/- 0.23, N = 69.45

bonecrusher-compbio-001

Processor: 4 x AMD Opteron 6282 SE @ 2.60GHz (64 Cores), Motherboard: Dell 0VKT0M, Chipset: ATI RD890 + SB7x0/SB8x0/SB9x0, Memory: 16 x 16384 MB 1600MHz, Disk: 500GB Seagate ST500NM0011 + 2000GB Seagate ST2000NM0011, Graphics: ASPEED ASPEED Family

OS: Ubuntu 11.10, Kernel: 3.0.0-32-server (x86_64), Display Driver: aspeed, Compiler: GCC 4.6.1, File-System: ext4

System Notes: .

Testing initiated at 30 April 2013 12:53 by user helios.