fd-clusnode21.computational-biology

2 x Intel Xeon 5160 testing on RedHatEnterpriseServer 5.6 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1211077-SU-FDCLUSNOD02
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
fd-clusnode21_cb
November 07 2012
 
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fd-clusnode21.computational-biologyOpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon 5160 @ 2.99GHz (2 Cores)Intel 5000X MCH2048 MB + 2048 MB + 2048 MB + 2048 MB + 4096 MB + 4096 MB + 4096 MB + 4096 MB DDR2-667MHz73GB DF072A9844Matrox MGA G200e [Pilot] (SEP1)Philips 150BBroadcom NetXtreme BCM5721 Gigabit PCIRedHatEnterpriseServer 5.62.6.18-238.el5 (x86_64)GCC 4.1.2 20080704ext3ProcessorChipsetMemoryDiskGraphicsMonitorNetworkOSKernelCompilerFile-SystemFd-clusnode21.computational-biology BenchmarksSystem Logs- --disable-dssi --disable-libunwind-exceptions --disable-plugin --enable-__cxa_atexit --enable-checking=release --enable-java-awt=gtk --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --host=x86_64-redhat-linux --mandir=/usr/share/man --with-cpu=generic --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchfd-clusnode21_cb714212835SE +/- 0.03, N = 330.021. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentfd-clusnode21_cb510152025SE +/- 0.03, N = 320.541. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysisfd-clusnode21_cb1224364860SE +/- 0.43, N = 354.54