7-sep-2012

2 x Intel Xeon E5-2643 0 testing with a Supermicro X9DAi and NVIDIA GeForce GT 640 2048MB on Scientific Linux 6.3 (Carbon) via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1209074-BY-7SEP2012037
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September 07 2012
 
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7-sep-2012OpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon E5-2643 0 @ 3.30GHz (16 Cores)Supermicro X9DAiIntel Xeon E5/Core130048MB5 x 1000GB Seagate ST1000DM003-9YN1NVIDIA GeForce GT 640 2048MB (901/891MHz)Intel C600/X79Intel I350 Gigabit ConnectionScientific Linux 6.3 (Carbon)2.6.32-279.5.1.el6.x86_64 (x86_64)GNOME 2.28.2X Server 1.10.6NVIDIA 304.434.2.0 NVIDIAGCC 4.4.6 20120305ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolution7-sep-2012 BenchmarksSystem Logs- --build=x86_64-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --with-ppl --with-tune=generic - SELinux: Enabled.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchnone3691215SE +/- 0.11, N = 39.301. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentnone1.2782.5563.8345.1126.39SE +/- 0.04, N = 35.681. (CC) gcc options: -O3 -lm -lpthread