Open64 test 3

hmmer john-the-ripper mafft mrbayes n-queens

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1208154-SU-OPEN64TES85
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Bioinformatics 3 Tests
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Open64 -march=anyx86
August 15 2012
 
Open64 -march=auto
August 15 2012
 
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Open64 test 3OpenBenchmarking.orgPhoronix Test SuiteAMD E-350 @ 1.60GHz (2 Cores)Acer JE40_BZAMD Family 14h Root Complex2048MB320GB TOSHIBA MK3265GSAMD Radeon HD 6310 256MB (200/533MHz)ATI R6xx HDMIAtheros AR8151 v2.0 Gigabit + Atheros AR9287 WirelessSUSE LINUX 12.13.5.0-TuoLei-1.16-desktop (x86_64)GNOME Shell 3.2.2.1X Server 1.10.4radeon 6.14.22.1 Mesa 7.11 Gallium 0.4Open64 4.5.2 + GCC 4.6 + PathScale 4.0.12.1 + Clang 3.0 (SVN 145598) + LLVM 3.0btrfs1366x768ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionOpen64 Test 3 BenchmarksSystem Logs- Scaling Governor: performance

Open64 test 3hmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny Analysisjohn-the-ripper: Blowfishn-queens: Elapsed TimeOpen64 -march=anyx86Open64 -march=auto111.9852.1765.31463565.74111.4857.9665.39558564.03OpenBenchmarking.org

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchOpen64 -march=anyx86Open64 -march=auto306090120150111.98111.48-march=anyx86-march=auto1. (CC) opencc options: -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentOpen64 -march=anyx86Open64 -march=auto132639526552.1757.961. (CC) opencc options: -O3 -lm -lpthread

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisOpen64 -march=anyx86Open64 -march=auto153045607565.3165.39

John The Ripper

OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Test: BlowfishOpen64 -march=anyx86Open64 -march=auto1202403604806004635581. (CC) opencc options: -fopenmp -lcrypt

N-Queens

OpenBenchmarking.orgSeconds, Fewer Is BetterN-Queens 1.0Elapsed TimeOpen64 -march=anyx86Open64 -march=auto120240360480600565.74564.031. (CC) opencc options: -static -O2