comp_bio_08Jul2011

Intel Core i7-2600K testing with a ASUS P8P67 WS REVOLUTION under SUSE LINUX 11.4 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1107080-GR-COMPBIO0803
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comp_bio_08Jul2011
July 08 2011
 
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comp_bio_08Jul2011OpenBenchmarking.orgPhoronix Test SuiteIntel Core i7-2600K @ 3.40GHz (8 Cores)ASUS P8P67 WS REVOLUTIONIntel 2nd Generation Core Family8192MB2 x 1000GB SAMSUNG HD103SJ + 500GB HM500JINVIDIA GeForce GTX 560 Ti 1024MB (900/2100MHz)Realtek ALC889SUSE LINUX 11.42.6.37.6-0.5-desktop (x86_64)KDE 4.6.00X Server 1.9.3NVIDIA 270.41.064.1.0 NVIDIA 270.41.06GCC 4.5ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionComp_bio_08Jul2011 BenchmarksSystem Logs- Intel SpeedStep was enabled.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchcomp_bio_08Jul20113691215SE +/- 0.04, N = 312.03

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.706Multiple Sequence Alignmentcomp_bio_08Jul2011510152025SE +/- 0.01, N = 319.38

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysiscomp_bio_08Jul2011510152025SE +/- 0.04, N = 321.93